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A Glossary for Systems Biology Contents Index - Glossary - About this Systems Biology Index Submit - Comment References 1 B. Alberts, D. Bray, J. Lewis, M. Raff, K. Roberts, and J.D. Watson. Molekularbiologie der Zelle. VCH Verlagsgesellschaft, 2$^{nd}$ edition, 1995. 2 U. Alon. Response regulator output in bacterial chemotaxis. EMBO J., 17:4238-4348, 1998. 3 U. Alon, N. Barkai, S. Laibler, and M.G. Surette. Robustness in bacterial chemotaxis. nature, 397:168-171, 1999. 4 Altruis Biomedical Network, Altruis LL. Cell-Biology.com. http://www.cell-biology.com, 2000-2002. 5 W.R. Ashby. Design for a Brain. Chapman and Hall, London, 2$^{nd}$ edition, 1960. 6 W.R. Ashby. Adaptation. In F. Heylighen, editor, Web Dictionary of Cybernetics and Systems, part of the Principia Cybernetica Web. Principia Cybernetica, Brussels and Los Alamos, http://pespmc1.vub.ac.be/ASC/ADAPTATION.html, 2001. 7 K.J. Åström. The Control Handbook, chapter PID Control, pages 198-200. 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A model of excitation and adaptation in bacterial chemotaxis. Biophys. J., 68:708-722, 1995. 23 R. Heinrich and S. Schuster. The Regulation of Cellular Systems. Chapman & Hall, New York/NY, 1996. 24 L. Hood. Computing life: The challenge ahead. IEEE Engineering in Medicine and Biology Special Issue, 20(4):20, July/August 2001. 25 L. Hood, T. Ideker, and T. Galitski. A new approach to decoding life: Systems biology. In Annual Review of Genomics and Human Genetics 2001, volume 2, pages 343-372. Annual Reviews, Palo Alto/CA, 2001. 26 IIASA. Sensitivity analysis. In F. Heylighen, editor, Web Dictionary of Cybernetics and Systems, part of the Principia Cybernetica Web. Principia Cybernetica, Brussels and Los Alamos, http://pespmc1.vub.ac.be/ASC/SENSIT_ANALY.html, 2001. 27 P. Janich and M. Weingarten. Wissenschaftstheorie der Biologie. UTB für Wissenschaft, Stuttgart, www.utb.de, 1999. 28 H. Jeske. Klonen oder Sex: Genetik für Andersdenkende. Talk on May 5, 2002 at the University of Stuttgart, GER, in the series 'Stuttgart zu Gast in der Universiät' ('Stuttgart visits Stuttgart University'), May 2002. 29 E.R Kandel, J.H. Schwartz, and T.M Jessell, editors. Essentials of Neural Science and Behavior. Appleton & Lange, Stanford/CT, 1995. 30 M.L. Kirsch. Chemotactic methyltransferase promotes adaptation to repellents in bacillus subtilis. J. Biol. Chem., 268:25350-25356, 1993. 31 H. Kitano. Foundations of Systems Biology, chapter Systems Biology: Toward System-level Understanding of Biological Systems, pages 1-29. MIT Press, Cambridge/MA, 2001. 32 H. Kitano. Foundations of Systems Biology, chapter Preface, pages xiii-xv. MIT Press, Cambridge/MA, 2001. 33 H. Kitano. Foundations of Systems Biology. MIT Press, Cambridge/MA, 2001. 34 H. Kitano. Systems biology: A brief overview. Science, 295:1662-1664, 2002. 35 K. Krippendorff. Reliability. In F. Heylighen, editor, Web Dictionary of Cybernetics and Systems, part of the Principia Cybernetica Web. Principia Cybernetica, Brussels and Los Alamos, http://pespmc1.vub.ac.be/ASC/RELIABILITY.html, 2001. 36 K. Krippendorff. System. In F. Heylighen, editor, Web Dictionary of Cybernetics and Systems, part of the Principia Cybernetica Web. Principia Cybernetica, Brussels and Los Alamos, http://pespmc1.vub.ac.be/ASC/SYSTEM.html, 2001. 37 D. Kronseder, editor. Multimedia-Enzyklopädie 2002. Wissen digital Software Verlags GmbH, München, www.wissen-digital.de, CD-ROM edition, 2001. 38 J.M. Lackie. Contact sensitivity. In J.M. Lackie and J.A.T. Dow, editors, The Dictionary of Cell and Molecular Biology. Academic Press (Harcourt Brace and Company), London. San Diego. New York. Boston. Sydney. Tokyo. Toronto, http://www.mblab.gla.ac.uk/ julian/dict2.cgi?1507, 3$^{rd}$ edition, 1999. 39 D.A. Lauffenburger. Cell signaling pathways as control modules: Complexity for simplicity? Proceedings of the National Academy of Science, USA, 97(10):5031-5033, 2000. 40 S. Leibler and M.B. Elowitz. A synthetic oscillytory network of transcriptional regulators. nature, 403:335-338, 2000. 41 J.W. Lengeler. Die biologische Zelle als komplexes Informationssystem. Biologen in unserer Zeit, (5):65-70, 1996. 42 J.W. Lengeler. Metabolic networks: A signal oriented approach to cellular models. Biol. Chem., 381:911-920, Sept./Okt. 2000. 43 J.W. Lengeler, G. Drews, and H.G. Schlegel, editors. Biology of the Procaryotes. Thieme, 1999. 44 W.S. Levine, editor. The Control Handbook. The Electrical Engineering Handbook Series. CRC Press, Inc., Boca Raton/FA, 1995. 45 H.H. McAdams and H. Kitano. Gene regulation: Towards a circuit engineering discipline. Current Biology, 10:R318-R320, 2000. 46 Incorporated Merriam-Webster. Merriam-webster online - the language center. http://www.m-w.com/. 47 M.D. Mesarovic. System Theory and Biology, chapter System theory and biology - view of a theoretician, pages 59-87. Springer-Verlag, New-York/NY, 1968. 48 Human Genome Organization. Human Genome Project (HGP). http://www.ornl.gov/hgmis/. 49 Human Genome Organization. The Human Genome Organization (HUGO). http://www.gene.ucl.ac.uk/hugo/. 50 K. Patch. Biology harbors hidden complexity. TRN News, TRN 030602, March 2002. 51 H.-O. Pleitgen, H. Jürgens, and D. Saupe. Fractals for the Classroom, Part 1. Springer, New York/NY, 1992. 52 J. Port and J. Nagel. Biomedizinische Technik. Course material, Institute of Biomedical Engineering, University of Stuttgart, 1998. 53 German Human Genome Project. German Human Genome Project (HGP). http://www.dhgp.de/. 54 I. Rojdestvenski, M. Cottam, G. Öquist, and Y.-I. Park. Robustness and time-scale hierarchy in biological systems. BioSystems, 50(1):71-82, 1999. 55 M.A. Savageau, E.O. Voit, and D.H. Irvine. Biochemical systems theory and metabolic control theory: 1. Fundamental similarities and differences. Mathematical Biosciences, 86:127-145, 1987. 56 S. Schandorff, F. Clark, and L. Croft. ISIS - Intron Sequence and Information database. http://isis.bit.uq.edu.au/phy_struct.phtml, 2002. 57 H.G. Schlegel. Allgemeine Mikrobiologie. Thieme, 6$^{th}$ edition, 1985. 58 B. Schöberl. Mathematical Modeling of Signal Transduction Pathways in Mammalian Cells at the Example of the EGF induced MAP Kinase Cascade and TNF ReceptorCrosstalk. PhD thesis, University of Magdeburg, GER, 2002. 59 E.O. Voit. Computational Analysis of Biochemical Systems - A Practical Guide for Biochemists and Molecular Biologists. Cambridge University Press, Cambridge, UK, 2000. 60 L. von Bertalannffy. General Systems Theory, Foundations, Development, Applications. George Braziller, New York/NY, 1969. 61 N. Wiener. Cybernetics - Control and Communication in the Animal and the Machine. John Wiley & Sons, New York/NY, 1948. 62 O. Wolkenhauer. Systems biology: The reincarnation of systems theory applied in biology? Briefings in Bioinformatics, 2(3):258-270, September 2001. 63 T.-M. Yi, Y. Huang, M.I. Simon, and J.C. Doyle. Robust perfect adaptation in bacterial chemotaxis through integral feedback control. Proceedings of the National Academy of Science, USA, 97(9):4649-4653, 2000.   Contents   Index Glossary Submit Comment

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